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TF312979
 Tree families database The Sanger Institute Beijing Genomics Institute
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Instructions

RRN3PANTR1311.5
RRN3HUMAN1309.2
ENSMMUT00000004236MACMU1306.9
XP_001488975HORSE1297.1
XP_001518561ORNAN1293.3
Rrn3MOUSE1283.5
ENSMODT00000005785MONDO1283.2
XP_536965CANFA1279.3
XP_594080BOVIN1266.6
ENSXETT00000012169XENTR1234
XR_026846CHICK1206.4
RRN3TETNG1183.6
RRN3_F3GASAC1167.4
dwil_GLEANR_7937_caf1DROWI1163.7
dmoj_GLEANR_1185_caf1DROMO1159.6
dvir_GLEANR_1306_caf1DROVI1155.7
dere_GLEANR_6262_caf1DROER1138.6
dsec_GLEANR_20387_caf1DROSE1135.3
Tif-IA-RADROME1128.2
dgri_GLEANR_13528_caf1DROGR1125.6
dyak_GLEANR_13182_caf1DROYA1125.4
dper_GLEANR_3061_caf1DROPE1110.6
ENSOPRT00000008281OCHPR1076.2
AAEL012265-RAAEDAE1046.9
XP_319773ANOGA1018.9
ENSLAFT00000002030LOXAF982.3
ENSCINT00000023678CIOIN958.2
WBGene00007980_F2CAEEL939
cr01.sctg25.wum.88.1CAERE932.6
ENSPPYT00000008394PONPY927.5
CBG03634CAEBR911.5
RGD1305001_predicted_F2RAT900.5
ENSCSAVT00000018154CIOSA831.6
At2g34750.1ARATH817.2
At1g30590.1ARATH780.5
rrn3SCHPO765.3
Smp_143670SCHMA661.6
ENSETET00000005970ECHTE661.3
jgi|Brafl1|93956|fgenesh2_pg.sBRAFL647.7
ENSDNOT00000000908DASNO574.1
ENSOGAT00000002543OTOGA528.3
jgi|Triad1|52940|fgeneshTA2_pgTRIAD526.7
ENSSTOT00000009283SPETR516.4
ENSMLUT00000003472MYOLU482.6
ENSOCUT00000006704RABIT464.5
ENSMICT00000015026MICMU409
ENSTBET00000014389TUPGB408
ENSSART00000002016SORAR390.4
ENSFCAT00000015344FELCA390.3
At2g39240.1ARATH369.5
ENSCPOT00000003755CAVPO341.5
ENSPPYT00000009041PONPY327.8
AC092375HUMAN318.2
dsim_GLEANR_5369_caf1DROSI213
BGIBMGA006627BOMMO210.6
Bm1_40930ABRUMA209.7
BGIOSIFCE023389.1ORYSA200.7
ENSEEUT00000014017ERIEU184
ENSOCUT00000009337RABIT127.6
ENSPTRT00000014496PANTR125.1
DDB0188479DICDI115.1
RRN3YEAST104.7
ENSEEUT00000009082ERIEU98.2
ENSOGAT00000011966OTOGA83.9
ENSCPOT00000003753CAVPO82.4
ENSTBET00000015957TUPGB79.6
ENSSART00000002026SORAR66.4
AC009093HUMAN12.2
BGIOSIFCE014807.1ORYSA11.7
jgi|Monbr1|30451|fgenesh2_pg.sMONBE11.4
ENSPPYT00000008546PONPY11.3
XP_001152385PANTR10.6
DDB0217981DICDI10.2
dana_GLEANR_5931_caf1DROAN10
jgi|Capca1|186897|fgenesh1_pg.CAPIT10
BGIOSIFCE007214.1ORYSA9.9

Descriptions
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AccessionTF312979
SymbolRRN3
Family NameRNA polymerase I-specific transcription initiation factor RRN3 Uncharacterized protein ENSP00000219758
Family Sizefull: 58

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Instructions ATV TreeView

At1g30590.1_ARATH
At2g39240.1_ARATH
At2g34750.1_ARATH
DDB0188479_DICDI
rrn3_SCHPO
RRN3_YEAST
RRN3_HUMAN
RRN3_PANTR
AC009093_HUMAN
XP_001152385_PANTR
ENSMMUT00000004236_MACMU
XP_594080_BOVIN
XP_536965_CANFA
Rrn3_MOUSE
RGD1305001_predicted_F2_RAT
ENSMODT00000005785_MONDO
XR_026846_CHICK
ENSXETT00000012169_XENTR
RRN3_TETNG
RRN3_F3_GASAC
ENSCINT00000023678_CIOIN
ENSCSAVT00000018154_CIOSA
Tif-IA-RA_DROME
dper_GLEANR_3061_caf1_DROPE
AAEL012265-RA_AEDAE
XP_319773_ANOGA
WBGene00007980_F2_CAEEL
CBG03634_CAEBR
cr01.sctg25.wum.88.1_CAERE
Smp_143670_SCHMA

View MultiAlignment
Instructions

AAEL012265
transcription initiation factor RRN3
supercontigsupercont1.673: 443038-445249
Taxon: Aedes aegypti [7159]
AGAP009024
chromosome3R: 23783825-23786267
Taxon: Anopheles gambiae [7165]
At1g30590
68414.m03742 RNA polymerase I specific transcription initiation factor RRN3 family protein weak similarity to RNA polymerase I transcription factor RRN3 [Homo sapiens] GI:7670100; contains Pfam profile PF05327: RNA polymerase I specific transcription initiation factor RRN3
chromosome1: 10835957-10839506
Taxon: Arabidopsis thaliana [3702]
At2g34750
68415.m04267 RNA polymerase I specific transcription initiation factor RRN3 family protein contains Pfam PF05327: RNA polymerase I specific transcription initiation factor RRN3; similar to RRN3 (GI:7670100) [Homo sapiens] similar to RNA polymerase I specific transcription initiation factor RRN3 (Swiss-Prot:P36070) [Saccharomyces cerevisiae]
chromosome2: 14667527-14670871
Taxon: Arabidopsis thaliana [3702]
At2g39240
68415.m04819 RNA polymerase I specific transcription initiation factor RRN3 family protein contains Pfam profile PF05327: RNA polymerase I specific transcription initiation factor RRN3
chromosome2: 16391863-16394905
Taxon: Arabidopsis thaliana [3702]
Bm1_40930A
Bmal_supercontig14973: 21185-26497
Taxon: Brugia malayi [6279]
C36E8.1
Uncharacterized protein C36E8.1. [Source:Uniprot/SWISSPROT;Acc:P48322]
chromosomeIII: 3999635-4003871
Taxon: Caenorhabditis elegans [6239]
CBG03634
orthologous to C36E8.1 by best mutual match (eval=0)
cb25.fpc0066: 463914-468920
Taxon: Caenorhabditis briggsae [6238]
cr01.sctg25.wum.88
Contig25.eannot.1192.final.final
Contig25: 563360-567319
Taxon: Caenorhabditis remanei [31234]
dere_GLEANR_6262_caf1
scaffold_4845: 2053188-2062362
Taxon: Drosophila erecta [7220]
dgri_GLEANR_13528_caf1
scaffold_15126: 2583730-2585973
Taxon: Drosophila grimshawi [7222]
dmoj_GLEANR_1185_caf1
scaffold_6500: 12585141-12587291
Taxon: Drosophila mojavensis [7230]
dper_GLEANR_3061_caf1
scaffold_16: 382214-384471
Taxon: Drosophila persimilis [7234]
dsec_GLEANR_20387_caf1
scaffold_63: 10825-19229
Taxon: Drosophila sechellia [7238]
dvir_GLEANR_1306_caf1
scaffold_12963: 2426499-2428658
Taxon: Drosophila virilis [7244]
dwil_GLEANR_7937_caf1
scf2_1100000004516: 3743040-3745225
Taxon: Drosophila willistoni [7260]
dyak_GLEANR_13182_caf1
2R: 36681-40985
Taxon: Drosophila yakuba [7245]
ENSBTAG00000004804
chromosome25: 14768448-14794690
Taxon: Bos taurus [9913]
ENSCAFG00000018783
chromosome6: 31509546-31536701
Taxon: Canis familiaris [9615]
ENSCING00000012588
chromosome3q: 3654144-3659864
Taxon: Ciona intestinalis [7719]
ENSCPOG00000003711
genescaffoldGeneScaffold_6739: 152706-178592
Taxon: Cavia porcellus [10141]
ENSCSAVG00000010571
reftigreftig_30: 3554336-3561709
Taxon: Ciona savignyi [51511]
ENSDNOG00000000907
genescaffoldGeneScaffold_901: 6091-28006
Taxon: Dasypus novemcinctus [9361]
ENSECAG00000008861
chromosome13: 30307806-30334419
Taxon: Equus caballus [9796]
ENSEEUG00000014018
genescaffoldGeneScaffold_7564: 84374-103065
Taxon: Erinaceus europaeus [9365]
ENSETEG00000005970
genescaffoldGeneScaffold_973: 5820-48002
Taxon: Echinops telfairi [9371]
ENSFCAG00000015340
genescaffoldGeneScaffold_3080: 265160-277089
Taxon: Felis catus [9685]
ENSGACG00000004364
RNA polymerase I-specific transcription initiation factor RRN3 (Transcription initiation factor IA) (TIF-IA). [Source:Uniprot/SWISSPROT;Acc:Q9NYV6]
groupgroupXI: 72820-84698
Taxon: Gasterosteus aculeatus [69293]
ENSGALG00000002862
PREDICTED: Gallus gallus hypothetical LOC416414 (LOC416414), mRNA. [Source:RefSeq_dna;Acc:XR_026846]
chromosome14: 71986-86559
Taxon: Gallus gallus [9031]
ENSLAFG00000002030
genescaffoldGeneScaffold_4703: 26952-55427
Taxon: Loxodonta africana [9785]
ENSMICG00000015014
genescaffoldGeneScaffold_4796: 85240-133559
Taxon: Microcebus murinus [30608]
ENSMLUG00000003466
genescaffoldGeneScaffold_3664: 76526-147943
Taxon: Myotis lucifugus [59463]
ENSMMUG00000002991
chromosome20: 14912206-14948978
Taxon: Macaca mulatta [9544]
ENSMODG00000004597
NULL
chromosome6: 104869034-104901744
Taxon: Monodelphis domestica [13616]
ENSMUSG00000022682
RRN3 RNA polymerase I transcription factor homolog [Source:RefSeq_peptide;Acc:NP_001034610]
chromosome16: 13780849-13813365
Taxon: Mus musculus [10090]
ENSOANG00000000130
supercontigContig5164: 2991-23181
Taxon: Ornithorhynchus anatinus [9258]
ENSOCUG00000006704
genescaffoldGeneScaffold_5854: 69686-113613
Taxon: Oryctolagus cuniculus [9986]
ENSOGAG00000002540
genescaffoldGeneScaffold_5702: 96575-111319
Taxon: Otolemur garnettii [30611]
ENSOPRG00000008274
genescaffoldGeneScaffold_566: 8197-97440
Taxon: Ochotona princeps [9978]
ENSPPYG00000007129
chromosome16: 15310322-15374788
Taxon: Pongo pygmaeus [9600]
ENSPPYG00000007263
chromosome16: 28732405-28740520
Taxon: Pongo pygmaeus [9600]
ENSPTRG00000007801
RNA polymerase I-specific transcription initiation factor RRN3 (Transcription initiation factor IA) (TIF-IA). [Source:Uniprot/SWISSPROT;Acc:Q9NYV6]
chromosome16: 15402581-15438114
Taxon: Pan troglodytes [9598]
ENSPTRG00000007951
chromosome16_random: 3240479-3259553
Taxon: Pan troglodytes [9598]
ENSRNOG00000003326
chromosome10: 1501298-1525787
Taxon: Rattus norvegicus [10116]
ENSSARG00000002001
genescaffoldGeneScaffold_5749: 4346-38421
Taxon: Sorex araneus [42254]
ENSSTOG00000009277
genescaffoldGeneScaffold_3626: 132843-153947
Taxon: Spermophilus tridecemlineatus [43179]
ENSG00000085721
RNA polymerase I-specific transcription initiation factor RRN3 (Transcription initiation factor IA) (TIF-IA). [Source:Uniprot/SWISSPROT;Acc:Q9NYV6]
chromosome16: 15063101-15095591
Taxon: Homo sapiens [9606]
ENSG00000103472
Uncharacterized protein ENSP00000219758. [Source:Uniprot/SPTREMBL;Acc:A8MSK9]
chromosome16: 29013149-29031892
Taxon: Homo sapiens [9606]
ENSTBEG00000014385
genescaffoldGeneScaffold_4823: 110125-122984
Taxon: Tupaia belangeri [37347]
ENSTNIG00000010211
RNA polymerase I-specific transcription initiation factor RRN3 (Transcription initiation factor IA) (TIF-IA). [Source:Uniprot/SWISSPROT;Acc:Q9NYV6]
chromosomeUn_random: 3920042-3925965
Taxon: Tetraodon nigroviridis [99883]
ENSXETG00000005536
RRN3 RNA polymerase I transcription factor homolog [Source:RefSeq_peptide;Acc:NP_060897] [from human gene ENSG00000085721]
scaffoldscaffold_310: 264930-278814
Taxon: Xenopus tropicalis [8364]
FBgn0032988
chromosome2L: 22250098-22258179
Taxon: Drosophila melanogaster [7227]
Smp_143670
expressed protein
Smp_scaff000096: 905827-907699
Taxon: Schistosoma mansoni [6183]
SPAC18G6.11c
ribosomal DNA
chromosome1: 2236995-2238795
Taxon: Schizosaccharomyces pombe [4896]
YKL125W
RNA polymerase I-specific transcription initiation factor RRN3. [Source:Uniprot/SWISSPROT;Acc:P36070]
chromosomeXI: 207890-209774
Taxon: Saccharomyces cerevisiae [4932]
Last Modified Thu Aug 2 03:14:18 2007 treefam@sanger.ac.uk