TreeFam
ENSLAFT00000016349.1
 Tree families database The Sanger Institute Beijing Genomics Institute
[Home] [Search] [Browse] [TaxaView] [Download] [FAQ]

Navigation

Descriptions
TreeFam Ortholog
Ensembl Ortholog
Ensembl Family

Quick Search
example

Descriptions

Sequence IDENSLAFT00000016349.1 => Inparanoid
Transcript IDENSLAFT00000016349
Gene IDENSLAFG00000016353 (ENSLAFT00000016349.1)
SymbolVHL
SpeciesLoxodonta africana (LOXAF)
DescriptionVon Hippel-Lindau disease tumor suppressor (pVHL) (Protein G7). [Source:Uniprot/SWISSPROT;Acc:P40337]
Display IDVHL_LOXAF (TF318985)
Related FamilyTF318985 (ENSLAFT00000016349.1)
Xrefs
RefSeq_peptideENSG00000134086
Peptide
VPLKAGNVEEADVGAEESVAEEDGKDSGAEEPGPEESDAEESGAEENMEAGQRRPVLRSV
NSREPSQVIFCNYSPRVVLPVWLNFDGEPQPYPTLPPGKGRRIHSYRGHLWLFRDAGTYD
GLLVNQTELFVPSLNVDGQPIFANITLP
Nucleotide
GTGCCCCTGAAGGCGGGGAACGTAGAAGAGGCCGACGTGGGCGCCGAGGAATCGGTCGCC
GAAGAGGACGGCAAGGACTCGGGCGCCGAGGAGCCCGGCCCGGAAGAGTCCGACGCAGAG
GAGTCGGGCGCTGAGGAAAACATGGAGGCGGGGCAGCGGCGGCCGGTGCTGCGCTCGGTG
AACTCGCGCGAGCCGTCCCAGGTCATCTTCTGCAACTACAGCCCGCGTGTCGTTCTGCCC
GTGTGGCTCAACTTCGACGGCGAGCCGCAGCCCTACCCGACGCTGCCGCCGGGCAAGGGC
CGCCGCATCCACAGCTACCGAGGTCATCTTTGGCTCTTCAGAGATGCAGGGACATATGAT
GGGCTTCTCGTTAACCAAACTGAATTATTTGTGCCATCTCTCAATGTTGATGGACAGCCT
ATTTTTGCCAACATCACGCTGCCA

TreeFam Orthologs and Within-Species Paralogs [TF318985]

TranscriptGeneSpeciesAncestorScoreSymbol
CBG17370CBG17370Caenorhabditis briggsaeBilateria100
cr01.sctg11.wum.149cr01.sctg11.wum.149Caenorhabditis remaneiBilateria100cr01.sctg11.wum.149.1
AAEL001105-RCAAEL001105Aedes aegyptiBilateria100
AGAP002496-RAAGAP002496Anopheles gambiaeBilateria100XP_312444
ENSBTAT00000030804ENSBTAG00000016101Bos taurusEutheria54VHL
F08G12.4F08G12.4Caenorhabditis elegansBilateria100WBGene00006922
ENSCAFT00000008294ENSCAFG00000005149Canis familiarisEutheria54VHL
ENSGALT00000013678ENSGALG00000008397Gallus gallusAmniota91XP_414447
ENSDNOT00000001607ENSDNOG00000001606Dasypus novemcinctusEutheria54VHLL
FBtr0088115FBgn0041174Drosophila melanogasterBilateria100Vhl-RA
ENSETET00000011103ENSETEG00000011103Echinops telfairiAfrotheria78VHL
ENSFCAT00000011240ENSFCAG00000011238Felis catusEutheria54VHL
ENST00000339922ENSG00000189030Homo sapiensEutheria53VHLL
ENSMODT00000014341ENSMODG00000011254Monodelphis domesticaTheria5
ENSMUST00000035673ENSMUSG00000033933Mus musculusEutheria37Vhlh
ENSMLUT00000004566ENSMLUG00000004567Myotis lucifugusEutheria48VHL
ENSOGAT00000007590ENSOGAG00000007587Otolemur garnettiiEutheria38VHL
ENSOCUT00000002815ENSOCUG00000002817Oryctolagus cuniculusEutheria31VHLL
ENSRNOT00000013727ENSRNOG00000010258Rattus norvegicusEutheria36Vhl
ENSXETT00000003053ENSXETG00000001448Xenopus tropicalisTetrapoda85
ENSPTRT00000058562ENSPTRG00000030309Pan troglodytesEutheria45VHLL
ENSMMUT00000031625ENSMMUG00000022491Macaca mulattaEutheria47VHLL
ENST00000256474ENSG00000134086Homo sapiensEutheria46VHL
ENSDART00000103878ENSDARG00000070617Danio rerioEuteleostomi100
ENSORLT00000001842ENSORLG00000001489Oryzias latipesEuteleostomi100VHLL
ENSGACT00000000979ENSGACG00000000755Gasterosteus aculeatusEuteleostomi100VHLL_F2

Ensembl Orthologs and Within-Species Paralogs

GeneSpeciesAncestorMethodTreeFam
ENSMMUG00000022491Macaca mulattaEutheriaapparent_ortholog_one2oneTF318985;
ENSCAFG00000005149Canis familiarisEutheriaapparent_ortholog_one2oneTF318985;
ENSPTRG00000030309Pan troglodytesEutheriaapparent_ortholog_one2oneTF318985;
ENSBTAG00000016101Bos taurusEutheriaapparent_ortholog_one2oneTF318985;
ENSETEG00000011103Echinops telfairiEutheriaapparent_ortholog_one2oneTF318985;
ENSRNOG00000010258Rattus norvegicusEutheriaapparent_ortholog_one2oneTF318985;
ENSMUSG00000033933Mus musculusEutheriaapparent_ortholog_one2oneTF318985;
ENSOCUG00000002817Oryctolagus cuniculusEutheriaapparent_ortholog_one2oneTF318985;
ENSDNOG00000001606Dasypus novemcinctusEutheriaapparent_ortholog_one2oneTF318985;
ENSG00000189030Homo sapiensEutheriaapparent_ortholog_one2oneTF318985;
ENSGALG00000008397Gallus gallusAmniotaortholog_one2oneTF318985;
ENSMODG00000011254Monodelphis domesticaAmniotaapparent_ortholog_one2oneTF318985;
ENSXETG00000001448Xenopus tropicalisTetrapodaortholog_one2oneTF318985;
ENSORLG00000001489Oryzias latipesEuteleostomiortholog_one2oneTF318985;
NEWSINFRUG00000121189Fugu rubripesEuteleostomiortholog_one2one
GSTENG00027268001Tetraodon nigroviridisEuteleostomiortholog_one2one
ENSGACG00000000755Gasterosteus aculeatusEuteleostomiortholog_one2oneTF318985;
ENSANGG00000019695Anopheles gambiaeCoelomataortholog_one2one
AAEL001105Aedes aegyptiCoelomataortholog_one2oneTF318985;
CG13221Drosophila melanogasterCoelomataortholog_one2one

Ensembl Family

ENSF00000007956: VON HIPPEL LINDAU DISEASE TUMOR SUPPRESSOR PVHL

GeneSpeciesTreeFam
ENSORLG00000001489Oryzias latipesTF318985;
ENSXETG00000001448Xenopus tropicalisTF318985;
ENSGALG00000008397Gallus gallusTF318985;
ENSDNOG00000001606Dasypus novemcinctusTF318985;
ENSETEG00000011103Echinops telfairiTF318985;
ENSMMUG00000022491Macaca mulattaTF318985;
ENSPTRG00000030309Pan troglodytesTF318985;
ENSG00000189030Homo sapiensTF318985;
ENSG00000134086Homo sapiensTF318985;
ENSCAFG00000005149Canis familiarisTF318985;
ENSLAFG00000016353Loxodonta africanaTF318985;
ENSBTAG00000016101Bos taurusTF318985;
ENSOCUG00000002817Oryctolagus cuniculusTF318985;
ENSMUSG00000033933Mus musculusTF318985;
ENSRNOG00000010258Rattus norvegicusTF318985;
ENSMODG00000011254Monodelphis domesticaTF318985;
ENSMODG00000005201Monodelphis domesticaTF313087;
NEWSINFRUG00000121189Fugu rubripes
ENSGACG00000000755Gasterosteus aculeatusTF318985;
GSTENG00027268001Tetraodon nigroviridis

Last Modified Tue Nov 13 11:06:03 2007 treefam@sanger.ac.uk