TreeFam
ENSRNOT00000032843.1
 Tree families database The Sanger Institute Beijing Genomics Institute
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Descriptions
TreeFam Ortholog
Ensembl Ortholog
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Descriptions

Sequence IDENSRNOT00000032843.1 => Inparanoid
Transcript IDENSRNOT00000032843
Gene IDENSRNOG00000025042 (ENSRNOT00000032843.1)
SymbolPde3a
SpeciesRattus norvegicus (RAT)
DescriptioncGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A). [Source:Uniprot/SWISSPROT;Acc:Q62865]
Display IDPde3a_RAT (TF329631)
Related FamilyTF329631 (ENSRNOT00000032843.1)
Xrefs
EMBLPde3a
Uniprot/SWISSPROTPDE3A_RAT
EntrezGeneAAA84964.1
Peptide
MAVRGEAAQDWAKPGLRGPSPAPVARGDHRCRGGSPSSPRGSGCCWRALALQPLRRSPQL
SSALCAGSLSVLLALLVRLVGGEVGGELESSQEAAAEEEEEEGARGGVFPGPRGGAPGGG
AQLSPWLQPAALLFSLLCAFFWMGLCLLRAGVRLPLAVALLAACCAGEALVQLSLGVGDG
RLLSLPAAGVLLSCLGGATWLVLRLRLGVLMVALTSALRTVALVSLERFKVAWRPYLAYL
AAVLGLLLARYAEQLLPQCSGPAPPRERFGSQSSARTKEEIPGWKRRRRSSSVVAGEMSG
CGGKSHRRTSLPCIPREQLMGHSEWDHKRGSRGSQSGTSVTVDIAVMGEAHGLITDLLAD
PSLPPNVCTSLRAVSNLLSTQLTFQAIHKPRVNPTVTFSENYTCSDSEEGLEKDKLAIPK
RLRRSLPPGLLRRVSSTWTTTTSATGLPTLEPAPVRRDRSASIKPHEAPSPSAVNPDSWN
APVLMTLTKSRSFTSSYAVSAANHVKAKKQNRPGGLDKISPVPSPSSSPPQGSPTSSPVS
GIASVQFPESPEVTTKRGPGSHRALTYTQSAPDLSPQIPPSPVICSSCGRPYSQGNPADG
PSERSGPAMQKPNRTDDTSQVTSDYETNNNSDSSDILQNDEEAECQREPLRKASACGTYT
PQTMIFLDKPILAPEPLVMDNLDSIMDQLNTWNFPIFDLVENIGRKCGRILSQVSYRLFE
DMGLFEAFKIPVREFMNYFHALEIGYRDIPYHNRIHATDVLHAVWYLTTQPIPGLPSVIG
DHGSASDSDSDSGFTHGHMGYVFSKAYHVPDDKYGCLSGNIPALELMALYVAAAMHDYDH
PGRTNAFLVATSAPQAVLYNDRSVLENHHAAAAWNLFMSRPEYNFLVNLDHVEFKHFRFL
VIEAILATDLKKHFDFVAKFNAKVNDDVGIDWTNENDRLLVCQMCIKLADINGPAKCKDL
HLRWTEGIASEFYEQGDEEASLGLPISPFMDRSAPQLANLQESFISHIVGPLCHSYDSAG
LMPGKWVDDSDDSGDTDDPEEEEEEAETPHEEETCENSEAPRKKSFKRRRIYCQITQHLL
QNHMMWKKVIEEEQCLSGTENQAPDQAPLQHSSEQIQAIKEEEEEKGKPRAEETLAPQPD
L
Nucleotide
ATGGCAGTGCGGGGCGAGGCCGCCCAAGACTGGGCCAAGCCCGGTCTCCGAGGGCCGAGT
CCTGCCCCGGTGGCCAGAGGGGACCACCGCTGTCGTGGCGGGTCCCCTTCATCCCCTCGG
GGCTCGGGCTGTTGTTGGCGAGCCCTGGCGTTGCAGCCTCTCCGGCGCTCGCCGCAACTC
TCCTCCGCGTTGTGCGCGGGCTCCCTGTCCGTGCTGCTGGCGCTGCTGGTGAGGCTGGTC
GGCGGGGAGGTCGGAGGCGAGCTGGAGTCGAGTCAGGAGGCGGCGGCCGAGGAGGAGGAG
GAGGAAGGAGCCCGAGGGGGCGTCTTCCCGGGCCCTCGGGGAGGTGCTCCCGGGGGCGGC
GCGCAGCTCAGCCCTTGGCTGCAGCCGGCCGCGCTGCTCTTCAGTCTCCTGTGCGCCTTC
TTCTGGATGGGCTTGTGCCTGCTGCGCGCCGGGGTGCGCCTGCCTCTGGCCGTCGCGCTG
TTGGCCGCCTGCTGCGCCGGGGAAGCGCTGGTGCAGCTCTCCTTGGGCGTGGGGGACGGT
CGCCTGCTGTCGCTACCCGCCGCGGGGGTCCTGCTCAGCTGCCTAGGTGGCGCGACATGG
CTGGTGCTGAGGCTGAGGCTGGGCGTCCTCATGGTCGCTTTGACTAGCGCCCTCAGGACG
GTGGCCCTGGTTTCTCTGGAGAGGTTCAAGGTCGCCTGGAGACCTTACCTGGCATACTTG
GCGGCCGTGCTTGGGCTGCTGCTGGCCAGGTACGCCGAGCAGCTCCTGCCGCAGTGCTCC
GGGCCGGCTCCGCCCAGGGAGCGGTTTGGGTCCCAGTCGAGCGCGAGGACCAAGGAAGAG
ATTCCGGGGTGGAAGAGGAGGAGGCGGTCCAGCTCGGTGGTGGCCGGCGAGATGTCCGGC
TGCGGTGGCAAGTCTCACCGGAGGACCTCCCTGCCCTGCATACCCAGGGAGCAGCTCATG
GGCCATTCAGAATGGGACCACAAGAGAGGGTCACGAGGATCCCAGTCAGGAACCAGCGTC
ACCGTGGATATTGCCGTGATGGGCGAGGCGCATGGCCTCATTACCGACCTCCTGGCCGAC
CCTTCTTTGCCTCCGAATGTGTGCACGTCCTTGAGGGCCGTGAGCAACCTGCTCAGTACC
CAGCTCACCTTCCAGGCAATCCACAAGCCCAGAGTGAACCCCACTGTGACCTTCAGTGAG
AACTATACCTGCTCCGACTCTGAGGAAGGCTTGGAGAAAGACAAGCTGGCCATTCCCAAG
CGCCTGAGAAGAAGTTTGCCTCCAGGCTTGCTGAGGAGAGTTTCATCAACTTGGACAACT
ACCACCTCTGCCACAGGACTGCCTACCTTGGAGCCTGCGCCAGTGCGGAGGGACCGCAGC
GCCAGCATAAAGCCACATGAAGCCCCTTCACCCAGTGCTGTCAACCCTGACTCTTGGAAT
GCCCCAGTGTTGATGACTCTAACCAAAAGCAGGTCCTTCACTTCGTCCTATGCTGTCTCT
GCAGCTAACCACGTCAAAGCTAAAAAGCAAAACAGGCCAGGTGGCCTTGATAAGATTTCG
CCCGTTCCCTCGCCCTCCTCCTCACCTCCTCAAGGATCACCCACCAGCAGTCCTGTCAGT
GGCATTGCTTCCGTACAGTTCCCGGAATCCCCTGAAGTCACCACCAAACGAGGCCCTGGA
TCTCACAGGGCCTTAACTTACACCCAGAGTGCCCCTGACCTGTCCCCCCAGATCCCGCCC
TCACCTGTCATATGTAGCAGCTGTGGCAGACCTTACTCACAAGGGAATCCTGCTGATGGA
CCTTCAGAGAGAAGTGGCCCAGCCATGCAGAAACCAAACAGAACAGATGATACTTCTCAA
GTTACCTCTGATTATGAGACCAACAACAACAGTGACAGCAGCGACATCCTGCAGAATGAT
GAGGAAGCCGAGTGCCAGAGAGAGCCACTGAGGAAAGCATCGGCTTGTGGCACCTATACT
CCCCAGACCATGATCTTCCTGGACAAACCAATTCTTGCTCCAGAACCCCTGGTCATGGAT
AACCTGGATTCAATTATGGATCAGTTGAACACCTGGAATTTTCCAATTTTTGATTTAGTG
GAAAACATAGGAAGAAAATGTGGCCGTATTCTGAGCCAGGTGTCATACAGACTCTTTGAA
GACATGGGGCTCTTTGAAGCCTTTAAAATCCCGGTTAGGGAGTTTATGAATTACTTTCAT
GCTTTGGAGATCGGCTACAGGGACATTCCTTATCATAACAGAATCCACGCCACTGATGTT
TTGCACGCCGTGTGGTATCTCACAACACAGCCGATTCCTGGCCTCCCGAGTGTGATTGGT
GATCACGGCTCGGCAAGTGACTCTGATTCTGACAGTGGGTTTACACACGGACACATGGGA
TATGTGTTTTCCAAAGCGTATCATGTGCCAGATGACAAATATGGATGCCTGTCTGGAAAT
ATTCCAGCCCTGGAGTTGATGGCCCTGTATGTTGCTGCAGCCATGCATGACTACGATCAC
CCAGGAAGGACAAATGCTTTCCTGGTTGCCACTAGCGCCCCTCAGGCCGTGCTGTACAAT
GACCGTTCCGTTCTGGAGAACCATCACGCAGCTGCAGCCTGGAATCTCTTCATGTCCCGG
CCGGAGTATAACTTCTTAGTTAACCTGGACCATGTGGAATTTAAGCACTTCCGATTCCTA
GTCATTGAAGCAATTCTGGCTACTGACCTGAAGAAACACTTTGACTTTGTAGCCAAGTTT
AATGCCAAGGTGAATGATGATGTTGGGATAGATTGGACCAATGAAAACGACCGTCTCCTG
GTGTGTCAGATGTGTATAAAGTTGGCTGACATCAACGGGCCTGCTAAATGTAAGGACCTC
CACCTGCGGTGGACGGAGGGCATCGCCAGCGAGTTTTATGAGCAGGGCGATGAAGAAGCC
AGCCTTGGTTTGCCCATAAGCCCATTTATGGACCGCTCTGCCCCGCAGCTGGCCAATCTT
CAGGAGTCCTTTATCTCACACATCGTGGGTCCTCTTTGCCACTCCTACGACTCTGCGGGT
CTCATGCCGGGAAAATGGGTAGATGACAGTGATGATTCAGGAGACACTGATGACCCGGAA
GAAGAGGAGGAAGAGGCTGAAACACCACACGAGGAAGAAACCTGTGAAAACAGTGAAGCT
CCCAGAAAGAAAAGTTTCAAAAGAAGGAGAATCTACTGTCAAATAACTCAGCACCTTCTG
CAGAACCACATGATGTGGAAGAAAGTGATTGAAGAGGAGCAGTGTTTATCAGGCACAGAG
AACCAGGCCCCAGACCAGGCACCGCTGCAGCATTCCTCAGAACAAATCCAGGCTATCAAG
GAGGAGGAGGAAGAGAAGGGGAAGCCAAGAGCAGAGGAAACCCTCGCTCCACAACCAGAC
CTGTGA

TreeFam Orthologs and Within-Species Paralogs [TF329631]

TranscriptGeneSpeciesAncestorScoreSymbol
ENSDART00000026207ENSDARG00000004227Danio rerioEuteleostomi100si:dkey-48h7
ENSGALT00000021453ENSGALG00000013143Gallus gallusAmniota99PDE3A
ENSCINT00000011667ENSCING00000005633Ciona intestinalisChordata100
ENSCINT00000011671ENSCING00000015268Ciona intestinalisChordata100
ENSCSAVT00000015188ENSCSAVG00000008796Ciona savignyiChordata100
ENSDNOT00000018376ENSDNOG00000018374Dasypus novemcinctusEutheria9PDE3A
ENSETET00000018803ENSETEG00000018803Echinops telfairiEutheria13PDE3A
ENSFCAT00000000972ENSFCAG00000000972Felis catusEutheria10PDE3A
ENSGACT00000013279ENSGACG00000010032Gasterosteus aculeatusEuteleostomi100PDE3A--1-of-2-
ENSGACT00000011566ENSGACG00000008742Gasterosteus aculeatusEuteleostomi99PDE3A---2-of-2-
ENSMODT00000022656ENSMODG00000017859Monodelphis domesticaTheria98PDE3A
ENSMLUT00000017232ENSMLUG00000017228Myotis lucifugusEutheria7PDE3A
ENSORLT00000005650ENSORLG00000004498Oryzias latipesEuteleostomi100PDE3A---2-of-2-
ENSORLT00000010352ENSORLG00000008246Oryzias latipesEuteleostomi98PDE3A--1-of-2-
ENSOCUT00000007481ENSOCUG00000007479Oryctolagus cuniculusEutheria6PDE3A
ENSSART00000010277ENSSARG00000010286Sorex araneusEutheria4PDE3A
ENSTNIT00000019348ENSTNIG00000016031Tetraodon nigroviridisEuteleostomi100PDE3A--1-of-2-
ENSTNIT00000009299ENSTNIG00000006365Tetraodon nigroviridisEuteleostomi99PDE3A---2-of-2-
ENSMUST00000043259ENSMUSG00000041741Mus musculusMurinae100Pde3a_F2
ENSLAFT00000012242ENSLAFG00000012240Loxodonta africanaEutheria12PDE3A
ENSOGAT00000000849ENSOGAG00000000846Otolemur garnettiiEutheria9PDE3A
ENSMMUT00000011556ENSMMUG00000008269Macaca mulattaEutheria7PDE3A
ENST00000359062ENSG00000172572Homo sapiensEutheria7PDE3A
ENSPTRT00000045962ENSPTRG00000004748Pan troglodytesEutheria7PDE3A
ENSCAFT00000019682ENSCAFG00000012391Canis familiarisEutheria10PDE3A
ENSBTAT00000022940ENSBTAG00000017260Bos taurusEutheria10PDE3A
ENSRNOT00000015498ENSRNOG00000011417Rattus norvegicusEuteleostomi100Pde3b

Ensembl Orthologs and Within-Species Paralogs

GeneSpeciesAncestorMethodTreeFam
ENSMUSG00000041741Mus musculusMurinaeortholog_one2oneTF329631;
ENSCAFG00000012391Canis familiarisEutheriaortholog_one2oneTF329631;
ENSPTRG00000004748Pan troglodytesEutheriaapparent_ortholog_one2oneTF329631;
ENSG00000172572Homo sapiensEutheriaapparent_ortholog_one2oneTF329631;
ENSBTAG00000017260Bos taurusEutheriaapparent_ortholog_one2oneTF329631;
ENSMMUG00000008269Macaca mulattaEutheriaapparent_ortholog_one2oneTF329631;
ENSLAFG00000012240Loxodonta africanaEutheriaapparent_ortholog_one2oneTF329631;
ENSOCUG00000007479Oryctolagus cuniculusEutheriaapparent_ortholog_one2oneTF329631;
ENSETEG00000018803Echinops telfairiEutheriaapparent_ortholog_one2oneTF329631;
ENSDNOG00000018374Dasypus novemcinctusEutheriaapparent_ortholog_one2oneTF329631;
ENSMODG00000017859Monodelphis domesticaTheriaortholog_one2oneTF329631;
ENSGALG00000013143Gallus gallusAmniotaortholog_one2oneTF329631;
ENSDARG00000004227Danio rerioEuteleostomiortholog_one2oneTF329631;
ENSORLG00000004498Oryzias latipesEuteleostomiortholog_one2manyTF329631;
ENSGACG00000010032Gasterosteus aculeatusEuteleostomiortholog_one2manyTF329631;
GSTENG00029768001Tetraodon nigroviridisEuteleostomiortholog_one2many
ENSGACG00000008742Gasterosteus aculeatusEuteleostomiortholog_one2manyTF329631;
NEWSINFRUG00000162467Fugu rubripesEuteleostomiortholog_one2many
NEWSINFRUG00000163919Fugu rubripesEuteleostomiortholog_one2many
GSTENG00012092001Tetraodon nigroviridisEuteleostomiortholog_one2many
ENSORLG00000008246Oryzias latipesEuteleostomiortholog_one2manyTF329631;
ENSRNOG00000011417Rattus norvegicusEuteleostomiwithin_species_paralogTF329631;
E01F3.1Caenorhabditis elegansBilateriaortholog_one2manyTF314638;
ENSCSAVG00000008796Ciona savignyiChordataortholog_one2manyTF329631;

Ensembl Family

ENSF00000003042: CGMP INHIBITED 3' 5' CYCLIC PHOSPHODIESTERASE B EC_3.1.4.17 CYCLIC GMP INHIBITED PHOSPHODIESTERASE B CGI PDE B CGIPDE1

GeneSpeciesTreeFam
E01F3.1Caenorhabditis elegansTF314638;
ENSCING00000015268Ciona intestinalisTF329631;
ENSDARG00000056558Danio rerio
ENSDARG00000004227Danio rerioTF329631;
ENSDARG00000062190Danio rerioTF329631;
ENSORLG00000006744Oryzias latipes
ENSORLG00000004498Oryzias latipesTF329631;
ENSORLG00000008246Oryzias latipesTF329631;
ENSXETG00000019677Xenopus tropicalisTF329631;
ENSXETG00000015237Xenopus tropicalis
ENSGALG00000006035Gallus gallusTF329631;
ENSGALG00000013143Gallus gallusTF329631;
ENSDNOG00000018374Dasypus novemcinctusTF329631;
ENSDNOG00000006062Dasypus novemcinctusTF329631;
ENSETEG00000018803Echinops telfairiTF329631;
ENSETEG00000001715Echinops telfairiTF329631;
ENSMMUG00000008269Macaca mulattaTF329631;
ENSMMUG00000000759Macaca mulattaTF329631;
ENSPTRG00000003386Pan troglodytesTF329631;
ENSPTRG00000004748Pan troglodytesTF329631;
ENSG00000152270Homo sapiensTF329631;
ENSG00000172572Homo sapiensTF329631;
ENSCAFG00000008487Canis familiarisTF329631;
ENSCAFG00000012391Canis familiarisTF329631;
ENSLAFG00000012240Loxodonta africanaTF329631;
ENSLAFG00000008453Loxodonta africanaTF329631;
ENSBTAG00000017260Bos taurusTF329631;
ENSBTAG00000005218Bos taurusTF329631;
ENSOCUG00000007719Oryctolagus cuniculusTF329631;
ENSOCUG00000007479Oryctolagus cuniculusTF329631;
ENSMUSG00000041741Mus musculusTF329631;
ENSMUSG00000030671Mus musculusTF329631;
ENSRNOG00000025042Rattus norvegicusTF329631;
ENSRNOG00000011417Rattus norvegicusTF329631;
ENSMODG00000007280Monodelphis domesticaTF329631;
ENSMODG00000017859Monodelphis domesticaTF329631;
NEWSINFRUG00000165011Fugu rubripes
NEWSINFRUG00000141105Fugu rubripes
NEWSINFRUG00000162467Fugu rubripes
NEWSINFRUG00000163919Fugu rubripes
ENSCSAVG00000008803Ciona savignyiTF314638;
ENSGACG00000008742Gasterosteus aculeatusTF329631;
ENSGACG00000015640Gasterosteus aculeatusTF329631;
ENSGACG00000010032Gasterosteus aculeatusTF329631;
GSTENG00017807001Tetraodon nigroviridis
GSTENG00012092001Tetraodon nigroviridis
GSTENG00029768001Tetraodon nigroviridis

Last Modified Tue Nov 13 11:06:03 2007 treefam@sanger.ac.uk