TreeFam
ENSRNOT00000045408.2
 Tree families database The Sanger Institute Beijing Genomics Institute
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TreeFam Ortholog
Ensembl Ortholog
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Descriptions

Sequence IDENSRNOT00000045408.2 => Inparanoid
Transcript IDENSRNOT00000045408
Gene IDENSRNOG00000033099 (ENSRNOT00000045408.2)
SymbolDcc
SpeciesRattus norvegicus (RAT)
Descriptiondeleted in colorectal carcinoma [Source:RefSeq_peptide;Acc:NP_036973]
Display IDDcc_RAT (TF321506)
Related FamilyTF321506 (ENSRNOT00000045408.2)
Xrefs
EMBLDcc
EntrezGeneAAA41084.1
EntrezGeneAAA41085.1
EntrezGeneAAA41086.1
EntrezGeneAAB41099.1
Peptide
MENSLGCVWVPKLAFVLFGASLLSAHLQVTGFQIKPFTSLHFVSEPSDAVTMRGGNVLLN
CSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEAS
LGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDL
NPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQL
YFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNV
TDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVP
TVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP
AIPSSSILPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTT
QPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLHAVSAS
PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYTLRFLA
YNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKI
RHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPENDL
DESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDPTDPVDYYPLLDDFPTSGPDV
STPMLPPVGVQAVALTHEAVRVSWADNSVPKNQKTSDVRLYTVRWRTSFSASAKYKSEDT
TSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKP
RAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLSLDTMYYF
RIQARNAKGVGPLSDPILFRTLKVEHPDKMANDQGRHGDGGYWPVDTNLIDRSTLNEPPI
GQMHPPHGSVTPQKNSNLLVITVVTVGVLTVLVVVIVAVICTRRSSAQQRKKRATHSASK
RKGSQKDLRPPDLWIHHEEMEMKNIEKPAGTDPAGRGSPIQSCQDLTPVSHSQSESQMGS
KSASHSGQDTEEAGSSMSTLERSLAARRATRTKLMIPMEAQSNNPAVVSAIPVPTLESAQ
YPGILPSPTCGYPHPQFTLRPVPFPTLSVDRGFGAGRSQSVSEGPTAQQQPMLPPAQPEH
PSSEEAPSRTIPTACVRPTHPLRSFANPLLPPPMSAIEPKVPYTPLLSQPGPTLPKTHVK
TASLGLAGKARSPLLPVSVPTAPEVSEESHKPTEDPASVYEQDDLSEQMASLEGLMKQLN
AITGSAF
Nucleotide
ATGGAGAATAGTCTTGGATGTGTCTGGGTACCCAAGCTGGCTTTTGTACTCTTCGGAGCT
TCCTTGCTCAGCGCGCATCTTCAAGTCACGGGTTTCCAAATTAAACCTTTCACGTCACTT
CATTTTGTGTCTGAACCTTCTGATGCTGTCACAATGCGGGGAGGAAACGTCCTGCTCAAC
TGCTCTGCAGAGTCTGACCGCGGAGTCCCAGTCATCAAGTGGAAGAAAGATGGCCTTATC
CTGGCCTTGGGAATGGATGACAGAAAGCAGCAACTTCCTAATGGGTCTCTGTTGATACAA
AACATACTTCATTCCAGACACCATAAACCGGATGAAGGACTTTACCAATGCGAGGCATCC
TTAGGAGACTCTGGCTCAATTATTAGTCGGACAGCAAAAGTTATGGTAGCAGGACCACTG
AGGTTCCTCTCCCAGACAGAATCTATCACAGCCTTCATGGGAGATACAGTGTTACTTAAG
TGTGAAGTCATTGGGGACCCCATGCCAACAATACACTGGCAGAAGAATCAACAAGACCTC
AACCCGATCCCAGGAGACTCGCGTGTGGTCGTCTTGCCCTCCGGAGCATTGCAGATCAGC
CGACTTCAACCAGGAGACAGTGGAGTCTACCGATGCTCAGCTCGGAATCCAGCCAGCACA
AGAACAGGAAATGAAGCCGAAGTCAGGATTTTATCAGACCCAGGCCTGCATAGGCAGCTG
TATTTTCTGCAGAGACCATCCAATGTGATAGCCATTGAAGGGAAAGATGCTGTCCTGGAG
TGTTGTGTTTCTGGCTATCCTCCACCAAGTTTCACCTGGTTACGGGGCGAGGAGGTCATC
CAACTCAGGTCTAAAAAGTATTCGTTGTTGGGTGGGAGCAATTTGCTCATCTCTAATGTG
ACAGATGATGACAGTGGGACCTATACGTGCGTTGTCACATATAAGAATGAGAATATTAGT
GCCTCTGCAGAGCTCACGGTCTTGGTTCCGCCATGGTTTTTAAATCACCCTTCCAACCTC
TATGCCTATGAAAGCATGGACATTGAGTTTGAATGTGCAGTGTCCGGGAAGCCTGTGCCC
ACTGTGAATTGGATGAAGAATGGAGATGTGGTGATTCCTAGTGATTACTTTCAGATAGTG
GGAGGAAGCAACTTACGAATCCTTGGGGTGGTGAAATCAGATGAAGGCTTTTATCAATGT
GTGGCTGAAAATGAGGCTGGCAATGCCCAAAGTAGTGCCCAGCTGATTGTCCCCAAGCCT
GCCATCCCAAGCTCCAGCATCCTCCCTTCTGCTCCCAGAGATGTGGTCCCTGTCTTGGTT
TCTAGTCGCTTTGTCCGTTTGAGCTGGCGTCCACCTGCCGAAGCCAAAGGAAACATTCAA
ACATTCACAGTCTTTTTCTCCAGAGAGGGTGACAACAGGGAGCGAGCTTTGAATACAACC
CAGCCTGGGTCCCTTCAGCTTACTGTGGGAAACTTGAAACCAGAAGCCATGTATACCTTC
AGAGTTGTTGCCTACAATGAGTGGGGACCAGGGGAGAGCTCTCAACCCATCAAGGTGGCC
ACTCAGCCTGAGTTGCAAGTTCCAGGGCCAGTAGAAAACCTGCACGCTGTATCTGCCTCT
CCTACCTCAATTCTTATTACATGGGAACCCCCTGCCTATGCAAATGGTCCGGTTCAAGGT
TACAGATTGTTTTGCACTGAGGTGTCTACAGGAAAAGAACAGAATATAGAGGTTGATGGA
CTATCTTATAAACTGGAAGGCCTGAAAAAATTCACGGAATATACTCTTCGATTCCTTGCT
TATAATCGTTATGGTCCGGGAGTGTCTACCGATGACATAACAGTCGTTACACTTTCAGAT
GTGCCAAGTGCTCCACCTCAGAACGTCTCTCTGGAAGTGGTTAATTCAAGGAGTATCAAA
GTAAGCTGGCTCCCTCCTCCATCGGGAACACAAAATGGATTTATTACTGGCTATAAAATT
CGACACAGAAAGACTACCCGCAGGGGTGAGATGGAAACACTGGAACCCAATAACCTCTGG
TACCTCTTCACAGGATTGGAGAAGGGGAGTCAGTACAGTTTCCAAGTGTCAGCCATGACT
GTCAATGGCACTGGACCACCTTCTAACTGGTACACAGCAGAAACCCCAGAGAACGACTTA
GACGAGTCTCAAGTTCCTGACCAGCCAAGTTCTCTCCATGTGAGGCCCCAGACAAACTGC
ATCATCATGAGTTGGACTCCACCTCTCAACCCAAACATCGTGGTGAGAGGCTATATTATC
GGATATGGTGTTGGCAGCCCTTATGCCGAGACAGTGCGTGTAGACAGTAAGCAGCGGTAC
TATTCCATCGAGAGGCTGGAGTCGAGTTCTCATTATGTAATCTCCTTAAAAGCTTTCAAC
AATGCTGGAGAAGGTGTCCCTCTCTACGAAAGTGCCACTACCCGTTCCATAACAGACCCC
ACTGACCCCGTTGATTATTATCCTTTGCTTGATGATTTCCCCACCTCGGGCCCAGATGTC
TCCACCCCCATGCTCCCACCAGTAGGTGTGCAGGCTGTGGCTCTTACCCACGAGGCTGTG
AGGGTCAGCTGGGCAGACAACTCTGTCCCGAAGAACCAGAAGACATCCGACGTTCGGCTT
TACACGGTTCGGTGGAGGACCAGCTTTTCCGCCAGTGCCAAGTACAAGTCAGAAGACACA
ACGTCTCTCAGCTACACAGCGACTGGCCTCAAGCCAAATACCATGTATGAGTTCTCAGTC
ATGGTGACAAAGAACAGAAGGTCAAGCACGTGGAGCATGACTGCACACGCCACCACCTAC
GAAGCTGCCCCAACTTCTGCTCCCAAGGATTTGACAGTCATTACTCGTGAGGGGAAGCCT
CGTGCTGTCATTGTGAGCTGGCAGCCTCCCTTGGAAGCCAATGGGAAAATCACCGCTTAC
ATCTTGTTTTATACCTTGGACAAGAATATACCCATCGATGACTGGATTATGGAGACTATC
AGCGGTGACCGGCTTACCCATCAGATCATGGATCTGAGCCTGGACACTATGTATTACTTT
CGAATTCAAGCACGGAACGCTAAAGGCGTGGGGCCCCTCTCGGATCCCATCCTCTTCAGG
ACTTTGAAAGTGGAACACCCTGACAAAATGGCTAATGACCAAGGTCGTCATGGAGATGGA
GGTTATTGGCCAGTTGATACTAACTTGATTGATAGAAGCACTCTCAACGAACCACCCATT
GGACAAATGCACCCCCCACATGGCAGTGTAACTCCTCAAAAGAACAGCAACCTGCTTGTC
ATAACCGTGGTCACCGTGGGCGTTCTCACCGTGTTGGTTGTGGTCATTGTAGCAGTGATT
TGTACCCGGCGCTCTTCAGCCCAGCAAAGGAAGAAACGGGCCACGCACAGTGCGAGCAAG
AGGAAGGGCAGTCAGAAGGACCTCCGGCCTCCGGATCTTTGGATACATCATGAAGAAATG
GAAATGAAAAATATCGAGAAGCCGGCCGGAACCGACCCTGCAGGAAGAGGCTCCCCCATC
CAGAGTTGCCAAGACCTCACACCAGTCAGCCACAGCCAGTCAGAAAGCCAGATGGGAAGC
AAAAGTGCCTCCCATTCAGGTCAAGATACCGAGGAGGCAGGGAGCTCCATGTCTACTCTA
GAAAGGTCCCTTGCAGCACGCCGGGCCACCAGGACCAAGCTCATGATTCCCATGGAGGCC
CAGTCCAATAATCCTGCTGTCGTGAGTGCCATCCCTGTACCAACCCTAGAAAGTGCCCAG
TATCCAGGAATCCTCCCGTCTCCCACATGTGGATATCCGCATCCACAGTTCACTCTCCGG
CCAGTACCATTCCCAACACTGTCTGTGGACCGAGGTTTCGGAGCAGGAAGAAGTCAGTCT
GTGAGTGAAGGACCAACAGCACAACAACAACCCATGCTGCCCCCAGCTCAGCCTGAACAT
CCCAGCAGCGAAGAAGCCCCCAGCAGAACCATCCCTACAGCCTGTGTGCGGCCAACTCAC
CCACTCCGAAGTTTTGCAAACCCTTTGCTACCTCCACCTATGAGTGCAATAGAACCAAAA
GTCCCTTACACACCGCTTTTGTCGCAGCCAGGACCCACCCTTCCCAAGACTCATGTTAAA
ACGGCCTCCCTTGGGCTAGCAGGAAAGGCAAGGTCCCCTTTGCTTCCCGTGTCTGTGCCA
ACAGCCCCTGAAGTGTCTGAAGAGAGTCACAAGCCAACAGAGGATCCAGCCAGTGTATAT
GAACAGGATGACTTGAGTGAACAAATGGCGAGTTTGGAAGGGCTAATGAAGCAACTCAAT
GCCATCACAGGCTCCGCCTTTTGA

TreeFam Orthologs and Within-Species Paralogs [TF321506]

TranscriptGeneSpeciesAncestorScoreSymbol
CBG14917CBG14917Caenorhabditis briggsaeBilateria99
cr01.sctg18.wum.4cr01.sctg18.wum.4Caenorhabditis remaneiBilateria99cr01.sctg18.wum.4.1
T19B4.7T19B4.7Caenorhabditis elegansBilateria99WBGene00006776
ENSCINT00000027454ENSCING00000009804Ciona intestinalisChordata19
ENSDNOT00000001165ENSDNOG00000001164Dasypus novemcinctusEutheria6DCC
ENSETET00000013213ENSETEG00000013210Echinops telfairiEutheria22DCC
ENSFCAT00000012957ENSFCAG00000012953Felis catusEutheria4
ENSLAFT00000001980ENSLAFG00000001980Loxodonta africanaEutheria24DCC
ENSMODT00000014063ENSMODG00000011028Monodelphis domesticaMammalia0DCC
ENSMUST00000114943ENSMUSG00000060534Mus musculusMurinae100Dcc
ENSMLUT00000009658ENSMLUG00000009626Myotis lucifugusEutheria2
ENSOANT00000012901ENSOANG00000008115Ornithorhynchus anatinusMammalia1XP_001509438
ENSOGAT00000010553ENSOGAG00000010546Otolemur garnettiiEutheria3DCC
ENSOCUT00000000387ENSOCUG00000000384Oryctolagus cuniculusEutheria6DCC
ENSSART00000010182ENSSARG00000010153Sorex araneusEutheria6DCC
Smp_165740Smp_165740Schistosoma mansoniBilateria36
ENSCAFT00000000254ENSCAFG00000000157Canis familiarisEutheria5DCC
ENSMMUT00000019648ENSMMUG00000013999Macaca mulattaEutheria2DCC
ENSPTRT00000018408ENSPTRG00000010031Pan troglodytesEutheria2DCC
ENST00000304775ENSG00000187323Homo sapiensEutheria2DCC
ENSRNOT00000009312ENSRNOG00000006490Rattus norvegicusEuteleostomi100NEO1
ENSRNOT00000040854ENSRNOG00000033496Rattus norvegicusBilateria100NP_001102237_F2
ENSRNOT00000034288ENSRNOG00000023957Rattus norvegicusBilateria100RGD1307157
ENSRNOT00000051353ENSRNOG00000030800Rattus norvegicusBilateria100Punc
FBtr0087822FBgn0011592Drosophila melanogasterBilateria79fra-RA
AGAP006083-RBAGAP006083Anopheles gambiaeBilateria79
AAEL014592-RAAAEL014592Aedes aegyptiBilateria79

Ensembl Orthologs and Within-Species Paralogs

GeneSpeciesAncestorMethodTreeFam
ENSMUSG00000060534Mus musculusMurinaeortholog_one2oneTF321506;
ENSPTRG00000010031Pan troglodytesEuarchontogliresortholog_one2oneTF321506;
ENSG00000187323Homo sapiensEuarchontogliresortholog_one2oneTF321506;
ENSCAFG00000000157Canis familiarisEutheriaortholog_one2oneTF321506;
ENSOCUG00000000384Oryctolagus cuniculusGliresortholog_one2oneTF321506;
ENSMMUG00000013999Macaca mulattaEuarchontogliresortholog_one2oneTF321506;
ENSDNOG00000001164Dasypus novemcinctusEutheriaortholog_one2oneTF321506;
ENSLAFG00000001980Loxodonta africanaEutheriaortholog_one2oneTF321506;
ENSETEG00000013210Echinops telfairiEutheriaortholog_one2oneTF321506;
ENSMODG00000011028Monodelphis domesticaTheriaortholog_one2oneTF321506;
ENSORLG00000015328Oryzias latipesEuteleostomiortholog_one2oneTF321506;
NEWSINFRUG00000161275Fugu rubripesEuteleostomiortholog_one2one
GSTENG00026520001Tetraodon nigroviridisEuteleostomiortholog_one2many
ENSGACG00000018284Gasterosteus aculeatusEuteleostomiortholog_one2oneTF321506;
GSTENG00026521001Tetraodon nigroviridisEuteleostomiortholog_one2many
ENSRNOG00000006490Rattus norvegicusEuteleostomiwithin_species_paralogTF321506;
ENSANGG00000017864Anopheles gambiaeCoelomataortholog_one2many
AAEL014592Aedes aegyptiCoelomataortholog_one2manyTF321506;
CG8581Drosophila melanogasterCoelomataortholog_one2many
T19B4.7Caenorhabditis elegansBilateriaortholog_one2manyTF321506;
ENSCSAVG00000011525Ciona savignyiChordataortholog_one2many
ENSCING00000009804Ciona intestinalisChordataortholog_one2manyTF321506;

Ensembl Family

ENSF00000001797: PRECURSOR

GeneSpeciesTreeFam
T19B4.7Caenorhabditis elegansTF321506;
AAEL014592Aedes aegyptiTF321506;
ENSANGG00000017864Anopheles gambiae
ENSANGG00000026552Anopheles gambiae
CG8581Drosophila melanogaster
ENSCING00000009804Ciona intestinalisTF321506;
ENSDARG00000051825Danio rerio
ENSDARG00000008937Danio rerioTF321506;
ENSDARG00000041208Danio rerio
ENSORLG00000015328Oryzias latipesTF321506;
ENSORLG00000001596Oryzias latipesTF321506;
ENSXETG00000027137Xenopus tropicalis
ENSXETG00000005195Xenopus tropicalisTF321506;
ENSGALG00000001774Gallus gallusTF321506;
ENSGALG00000011665Gallus gallus
ENSDNOG00000001164Dasypus novemcinctusTF321506;
ENSDNOG00000002898Dasypus novemcinctusTF321506;
ENSETEG00000013210Echinops telfairiTF321506;
ENSETEG00000014757Echinops telfairiTF321506;
ENSMMUG00000009584Macaca mulattaTF321506;
ENSMMUG00000013999Macaca mulattaTF321506;
ENSPTRG00000010031Pan troglodytesTF321506;
ENSPTRG00000007257Pan troglodytesTF321506;
ENSG00000067141Homo sapiensTF321506;
ENSG00000187323Homo sapiensTF321506;
ENSCAFG00000000157Canis familiarisTF321506;
ENSCAFG00000017779Canis familiarisTF321506;
ENSLAFG00000010339Loxodonta africanaTF321506;
ENSLAFG00000001980Loxodonta africanaTF321506;
ENSBTAG00000004990Bos taurusTF321506;
ENSBTAG00000013780Bos taurus
ENSOCUG00000000384Oryctolagus cuniculusTF321506;
ENSOCUG00000002157Oryctolagus cuniculusTF321506;
ENSMUSG00000032340Mus musculusTF321506;
ENSMUSG00000060534Mus musculusTF321506;
ENSRNOG00000006490Rattus norvegicusTF321506;
ENSRNOG00000033099Rattus norvegicusTF321506;
ENSMODG00000009924Monodelphis domesticaTF321506;
ENSMODG00000011028Monodelphis domesticaTF321506;
NEWSINFRUG00000122217Fugu rubripes
NEWSINFRUG00000161275Fugu rubripes
ENSCSAVG00000011523Ciona savignyi
ENSCSAVG00000011525Ciona savignyi
ENSGACG00000018284Gasterosteus aculeatusTF321506;
ENSGACG00000017030Gasterosteus aculeatusTF321506;
GSTENG00010682001Tetraodon nigroviridis
GSTENG00011188001Tetraodon nigroviridis
GSTENG00026520001Tetraodon nigroviridis
GSTENG00026521001Tetraodon nigroviridis
GSTENG00018147001Tetraodon nigroviridis
GSTENG00002701001Tetraodon nigroviridis

Last Modified Tue Nov 13 11:06:03 2007 treefam@sanger.ac.uk